PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS73915.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 114aa    MW: 12828.6 Da    PI: 9.1335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS73915.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.5e-073411255
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                R +++ +++  L++l+ +      +K + a++L +A+eYIk+L+
  EPS73915.1  3 RKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKYLH 41
                6789999*********998.....8*****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.728140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-11158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-13259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0032246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.82E-7344No hitNo description
PfamPF000108.0E-5340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
QVRKEKMGDR ITALQQLVSP FGKTDTASVL SEAIEYIKYL HEQVNVLSSP YMKVASPTQQ  60
HMHQKQVRAT TRSNEETDLR SRGLCLVPVS STFPMANESG VVDFWTPTFG SNLR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095780.11e-49PREDICTED: transcription factor bHLH123
SwissprotQ8GXT34e-46BH123_ARATH; Transcription factor bHLH123
TrEMBLS8D3H35e-82S8D3H3_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc07g063830.2.12e-46(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-47bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]